Gene catalogue for the dog gut microbiome including FASTA file of nucleotide sequences (including padding, see coords file for exact coordinates) FASTA file of amino-acid sequences coords file (gene coordinates) Taxonomic predictions Functional predictions See the paper "Similarity of the dog and human gut microbiomes in gene content and response to diet" by Coelho et al. in Microbiome for details. We ask that you cite that publication when using this dataset in published literatur
The characterization of the microbial population of many niches of the organism, as the gastrointest...
The mammalian intestine is inhabited by a set of microorganisms (i.e., bacteria, viruses, fungi, ar...
Figure S7. (a) left: Principal coordinate analysis using weighted Unifrac distance [37]; right: corr...
Figure S3. Mapping rates of human reads to the gut gene catalogs of the four mammalian hosts conside...
Table S2. Basic statistics of the metagenomics data: number of base pairs and reads per sample. (XLS...
Figure S1. Gene accumulation curve for dog, pig, mouse, and human gut microbiomes. (PDF 1676Â kb
Figure S10. Prevalence change split by experimental cohorts (cf. Fig. 3a). (PDF 42 kb
Table S6. Nutritional content of the 3 diets used in this study. Values shown refer to percentage (%...
Background: Gut microbes influence their hosts in many ways, in particular by modulating the impact ...
Figure S6. Distance boxplots of the samples in the 3 diets using Bray-Curtis divergence on log-norma...
Figure S2. (a) Distance between samples from multiple hosts (and from two separate human cohorts as ...
A growing number of studies in the last decade described the microbial populations in different nich...
Table S5. Spearman correlation and SparCC-derived p value for all nodes in the co-abundance correlat...
Figure S8. (a) Firmicutes:Bacteroidetes ratio at the end of the Base feeding period (no significant ...
The characterization of the microbial population of many niches of the organism, as the gastrointest...
The characterization of the microbial population of many niches of the organism, as the gastrointest...
The mammalian intestine is inhabited by a set of microorganisms (i.e., bacteria, viruses, fungi, ar...
Figure S7. (a) left: Principal coordinate analysis using weighted Unifrac distance [37]; right: corr...
Figure S3. Mapping rates of human reads to the gut gene catalogs of the four mammalian hosts conside...
Table S2. Basic statistics of the metagenomics data: number of base pairs and reads per sample. (XLS...
Figure S1. Gene accumulation curve for dog, pig, mouse, and human gut microbiomes. (PDF 1676Â kb
Figure S10. Prevalence change split by experimental cohorts (cf. Fig. 3a). (PDF 42 kb
Table S6. Nutritional content of the 3 diets used in this study. Values shown refer to percentage (%...
Background: Gut microbes influence their hosts in many ways, in particular by modulating the impact ...
Figure S6. Distance boxplots of the samples in the 3 diets using Bray-Curtis divergence on log-norma...
Figure S2. (a) Distance between samples from multiple hosts (and from two separate human cohorts as ...
A growing number of studies in the last decade described the microbial populations in different nich...
Table S5. Spearman correlation and SparCC-derived p value for all nodes in the co-abundance correlat...
Figure S8. (a) Firmicutes:Bacteroidetes ratio at the end of the Base feeding period (no significant ...
The characterization of the microbial population of many niches of the organism, as the gastrointest...
The characterization of the microbial population of many niches of the organism, as the gastrointest...
The mammalian intestine is inhabited by a set of microorganisms (i.e., bacteria, viruses, fungi, ar...
Figure S7. (a) left: Principal coordinate analysis using weighted Unifrac distance [37]; right: corr...